multiple sequence alignment and amino acid composition of dreb2 proteins (Bioedit Company)
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Multiple Sequence Alignment And Amino Acid Composition Of Dreb2 Proteins, supplied by Bioedit Company, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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1) Product Images from "DREB2 (dehydration-responsive element-binding protein 2) type transcription factor in sorghum ( Sorghum bicolor ): genome-wide identification, characterization and expression profiles under cadmium and salt stresses"
Article Title: DREB2 (dehydration-responsive element-binding protein 2) type transcription factor in sorghum ( Sorghum bicolor ): genome-wide identification, characterization and expression profiles under cadmium and salt stresses
Journal: 3 Biotech
doi: 10.1007/s13205-018-1454-1
Figure Legend Snippet: Details of DREB2 genes in sorghum, rice, and Arabidopsis
Techniques Used:
Figure Legend Snippet: Comparison of amino acid alignments of the DREB2 proteins in Arabidopsis, rice, and sorghum, respectively. The yellow and red rectangles indicate the nuclear localization site (NLS) and AP2 domain structures, respectively. Sequences were aligned by ClustalW; identical and similar residues were shaded as black and grey, respectively, with 100% threshold
Techniques Used: Comparison
Figure Legend Snippet: Phylogenetic tree of 19 DREB2A proteins in three plant species, including Arabidopsis, rice, and sorghum. Tree was constructed by MEGA 7 using maximum-likelihood (ML) method with 1000 bootstraps. The sorghum DREB2 proteins were indicated as red diamonds
Techniques Used: Construct
Figure Legend Snippet: Expression levels of DREB2 genes in different five development stages of sorghum, such as seedling, stem elongation, booting, flowering, and dough stages by Genevestigator database
Techniques Used: Expressing
Figure Legend Snippet: Expression levels of DREB2 genes in different six anatomical parts of sorghum, such as pith, rind, shoot, roots, leaf, and internode by Genevestigator database
Techniques Used: Expressing
Figure Legend Snippet: Structure overlaps of DREB2 proteins at superimposition mode by CLICK server. The orange and blue 3D structures show the rice and sorghum, respectively. In addition, structure overlaps values (%) were indicated in figure legends
Techniques Used:
Figure Legend Snippet: Most conserved five motifs in DREB2 proteins in sorghum, rice, and Arabidopsis
Techniques Used: Sequencing
Figure Legend Snippet: Heat map of cis-regulatory elements in DREB2 genes in sorghum (green: absent and red: present). The cis-regulatory elements were investigated using 1000-bp upstream regions of DREB2 genes
Techniques Used: